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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20418545_20431194_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20418545 - 20431194

Intron Length:

12650

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTATTT

5'SS Class:

major

3'SS Sequence:

TTTTTTAATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATG

Flanking Amino Acid:

IRQIWTQKTTESRNMATKEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

74.4

36.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.1

0.81

0.8

82.5

32.8

Minor 5ss

42.6

-0.8

3.4

64.9

46.4

Minor BPS

0.74

1.1

78.3

32.8

Associated Gene:

Gene:

SLC6A6

Ensembl Gene ID:

ENSAPLG00000011407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025993

20391568 - 20438148

46581