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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2043169_2043249_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2043169 - 2043249

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

AAACTCTTATTT

Flanking Amino Acid:

ALLICYYYYKDWTISLGIGL

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.9

74.9

Major BPS

79.1

0.72

69.3

38.4

Major PPT

77.4

0.62

0.8

77.1

31.6

Minor 5ss

30.1

-2.3

3.2

37.9

46.9

Minor BPS

52.9

0.17

1.5

65.77

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044456

2041215 - 2055103

13889

ENSAPLT00000039833

2041215 - 2055103

13889