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Intron Name: Anas_platyrhynchos_platyrhynchos_13_204623_236721_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

204623 - 236721

Intron Length:

32099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCGTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGGTAAATAATT

Flanking Amino Acid:

ARGGMEEEKVWPKQQQQNNI

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.3

40.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

82.3

0.73

0.8

77.5

31.3

Minor 5ss

31.8

-2.1

3.1

36.5

41.9

Minor BPS

47.2

-0.1

68.29

42.1

Associated Gene:

Gene:

ARHGEF3

Ensembl Gene ID:

ENSAPLG00000003091

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046834

193615 - 317293

123679

ENSAPLT00000042761

201438 - 317844

116407

ENSAPLT00000019189

193081 - 317844

124764