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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20620754_20621621_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20620754 - 20621621

Intron Length:

868

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TTTTCTTTATTG

Flanking Amino Acid:

MADEVDQQQTTNTVEEP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

78.6

0.71

78.6

Major PPT

82.4

0.73

0.8

81.2

36.5

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

69.3

0.47

1.6

74.81

38.1

Associated Gene:

Gene:

LSM3

Ensembl Gene ID:

ENSAPLG00000014499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015107

20619147 - 20621649

2503