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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20622479_20623368_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20622479 - 20623368

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

GTAATTTTAATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

GTAATTTTAATA

Flanking Amino Acid:

KGNHSKEQTCSDSLKPPQRE

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.6

93.2

14.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

66.8

0.38

62.5

42.9

Minor 5ss

43.8

-0.7

2.8

58.1

46.5

Minor BPS

61.8

0.37

1.2

65.14

35.2

Associated Gene:

Gene:

XPC

Ensembl Gene ID:

ENSAPLG00000014249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014863

20621670 - 20632074

10405