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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20631216_20631861_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20631216 - 20631861

Intron Length:

646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTCTGC

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTTGTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCCTTTTCCATT

Flanking Amino Acid:

ERLKQRYSIKTEPSAPETEK

Intron Amino Acid Position:

934

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

58.6

41.4

Major BPS

100

1.24

0.5

100

Major PPT

91.8

0.94

0.8

92.3

26.6

Minor 5ss

51.3

0.05

2.4

68.4

42.5

Minor BPS

46.1

-0.2

1.9

62.38

43.1

Associated Gene:

Gene:

XPC

Ensembl Gene ID:

ENSAPLG00000014249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014863

20621670 - 20632074

10405