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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20638397_20638477_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20638397 - 20638477

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

AACTCAGTAACC

Flanking Amino Acid:

DDPHLGSADKVTVIARQKGD

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

77.8

38.7

Major BPS

68.1

0.45

58.1

38.5

Major PPT

75.6

0.58

33.7

Minor 5ss

33.3

-1.9

3.4

47.2

Minor BPS

48.9

-0.1

2.2

63.22

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014572

20635501 - 20646198

10698