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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20670566_20678243_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20670566 - 20678243

Intron Length:

7678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CGTATTTCCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

CTTACCGTATTT

Flanking Amino Acid:

KPMSSSEVCKPCSCQPMGSA

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

1.2

81.4

32.7

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

70.5

0.46

0.9

64.9

36.3

Minor 5ss

35.7

-1.6

3.3

48.3

41.3

Minor BPS

48.3

-0

2.3

72.13

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014519

20665017 - 20712332

47316