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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20723641_20724729_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20723641 - 20724729

Intron Length:

1089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTATTGTTAAAT

Flanking Amino Acid:

MNNLDPSVAQFPQELVTYGG

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.4

32.4

Major BPS

84.7

0.86

74.3

40.7

Major PPT

85.3

0.79

0.8

84.4

30.5

Minor 5ss

44.1

-0.6

2.9

58.3

46.6

Minor BPS

59.8

0.39

2.1

81.73

39.5

Associated Gene:

Gene:

UROC1

Ensembl Gene ID:

ENSAPLG00000013109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025611

20719290 - 20754387

35098

ENSAPLT00000013679

20715440 - 20754387

38948