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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20724790_20727380_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20724790 - 20727380

Intron Length:

2591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACAC

5'SS Class:

major

3'SS Sequence:

CTTTCCCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAGAAA

U12 Branch Point Sequence:

TATTCCGTCACT

Flanking Amino Acid:

NGQVFSNWAQFWLVMQYLSE

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

40.1

Major BPS

-0.1

1.3

56.1

37.3

Major PPT

87.6

0.85

0.6

22.6

Minor 5ss

30.9

-2.2

3.3

41.2

45.5

Minor BPS

0.36

2.4

85.03

41.4

Associated Gene:

Gene:

UROC1

Ensembl Gene ID:

ENSAPLG00000013109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025611

20719290 - 20754387

35098

ENSAPLT00000013679

20715440 - 20754387

38948