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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20727510_20728197_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20727510 - 20728197

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTATTTTTGATT

Flanking Amino Acid:

APRLIITNGMVIPNYSTRDE

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

77.9

36.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

78.7

0.65

0.8

77.6

36.1

Minor 5ss

37.4

-1.4

3.6

54.1

45.6

Minor BPS

71.1

0.75

1.1

82.58

32.6

Associated Gene:

Gene:

UROC1

Ensembl Gene ID:

ENSAPLG00000013109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025611

20719290 - 20754387

35098

ENSAPLT00000013679

20715440 - 20754387

38948