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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20729420_20729875_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20729420 - 20729875

Intron Length:

456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTGTGTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGAAAT

U12 Branch Point Sequence:

CTCCTGGTAACT

Flanking Amino Acid:

GPQGIVHGTVLTVLNAGRRY

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

82.5

29.7

Major BPS

50.6

0.02

1.1

36.4

Major PPT

66.9

0.38

1.1

61.8

44.4

Minor 5ss

35.3

-1.7

3.1

46.4

Minor BPS

43.3

-0.4

2.5

63.99

46.6

Associated Gene:

Gene:

UROC1

Ensembl Gene ID:

ENSAPLG00000013109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013679

20715440 - 20754387

38948

ENSAPLT00000025611

20719290 - 20754387

35098