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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20742546_20743465_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20742546 - 20743465

Intron Length:

920

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GCTTTTTTATTT

Flanking Amino Acid:

WIREAGRHSLVVGSQARILY

Intron Amino Acid Position:

518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

31.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.9

0.96

0.7

88.5

28.1

Minor 5ss

33.1

-1.9

3.1

38.4

40.8

Minor BPS

58.3

0.34

1.6

71.36

40.7

Associated Gene:

Gene:

UROC1

Ensembl Gene ID:

ENSAPLG00000013109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013679

20715440 - 20754387

38948

ENSAPLT00000025611

20719290 - 20754387

35098