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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20745170_20747973_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20745170 - 20747973

Intron Length:

2804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCAGA

5'SS Class:

major

3'SS Sequence:

TCTCTCCTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

TCTCTCCTCACA

Flanking Amino Acid:

NIYDGSAFCADMAVQNFVGD

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.3

68.9

43.8

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

81.6

0.71

0.7

75.9

26.3

Minor 5ss

34.2

-1.8

2.7

40.9

44.9

Minor BPS

48.3

-0.1

2.1

64.87

41.6

Associated Gene:

Gene:

UROC1

Ensembl Gene ID:

ENSAPLG00000013109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025611

20719290 - 20754387

35098

ENSAPLT00000013679

20715440 - 20754387

38948