Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_20753392_20754246_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20753392 - 20754246

Intron Length:

855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TCTTGTCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CACTCATTGATT

Flanking Amino Acid:

MMLSWDVSNGVARRCWSGND

Intron Amino Acid Position:

645

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

33.6

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

76.2

0.59

72.2

Minor 5ss

36.3

-1.6

2.7

38.8

40.3

Minor BPS

56.5

0.29

1.7

68.76

42.5

Associated Gene:

Gene:

UROC1

Ensembl Gene ID:

ENSAPLG00000013109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013679

20715440 - 20754387

38948

ENSAPLT00000025611

20719290 - 20754387

35098