Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_20957152_20957976_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20957152 - 20957976

Intron Length:

825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTGTT

5'SS Class:

major

3'SS Sequence:

TTTTGATTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCTCTTTTGATT

Flanking Amino Acid:

MTLASRLSTAANTGQMDDAQ

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

74.7

35.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

77.6

0.62

0.8

70.3

40.3

Minor 5ss

36.1

-1.6

3.5

45.5

Minor BPS

63.4

0.5

1.2

75.19

36.2

Associated Gene:

Gene:

SLC41A3

Ensembl Gene ID:

ENSAPLG00000012578

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013110

20951327 - 20969915

18589

ENSAPLT00000033081

20945745 - 20969915

24171