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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20959000_20961088_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20959000 - 20961088

Intron Length:

2089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

CTTCCTCTGATG

Flanking Amino Acid:

TTAFIAALSLGLVMIGVIIG

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.6

34.9

Major BPS

0.72

38.9

Major PPT

74.4

0.55

0.9

66.4

40.7

Minor 5ss

36.6

-1.5

2.9

46.4

44.2

Minor BPS

48.5

-0.2

1.7

56.27

39.7

Associated Gene:

Gene:

SLC41A3

Ensembl Gene ID:

ENSAPLG00000012578

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013110

20951327 - 20969915

18589

ENSAPLT00000033081

20945745 - 20969915

24171