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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20961236_20963831_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20961236 - 20963831

Intron Length:

2596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTGCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

GGGCATTTAAAT

Flanking Amino Acid:

GISSTLFKYIDVKYLSPLIC

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.5

36.8

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

82.4

0.73

0.9

77.2

Minor 5ss

38.5

-1.3

3.4

55.9

48.3

Minor BPS

48.9

-0

1.6

61.64

41.4

Associated Gene:

Gene:

SLC41A3

Ensembl Gene ID:

ENSAPLG00000012578

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033081

20945745 - 20969915

24171

ENSAPLT00000013110

20951327 - 20969915

18589