Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_21080813_21081384_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21080813 - 21081384

Intron Length:

572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTTT

5'SS Class:

strong_major

3'SS Sequence:

CATGTTTCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

CTTTACTTAAAA

Flanking Amino Acid:

HVGGCDATYKAYQNGTLQKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

1.1

87.9

29.3

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

79.2

0.66

0.9

72.5

37.4

Minor 5ss

55.9

0.2

2.5

39.7

Minor BPS

69.1

0.6

1.6

77.86

38.5

Associated Gene:

Gene:

TXNRD3

Ensembl Gene ID:

ENSAPLG00000011990

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012532

21070521 - 21082516

11996