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Intron Name: Anas_platyrhynchos_platyrhynchos_13_21179929_21180139_F

Intron Information:

Intron Rank:

129615

Intron Class:

major

Intron Phase:

Intron Coordinates:

21179929 - 21180139

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCACAT

U12 Branch Point Sequence:

TTGTCAGTGAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

74.4

36.1

Major BPS

62.5

0.31

1.2

38.9

Major PPT

85.5

0.8

76.9

37.3

Minor 5ss

34.5

-1.8

3.3

44.7

43.5

Minor BPS

44.6

-0.4

2.5

63.13

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019745

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027353

21179642 - 21181061

1420