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Intron Name: Anas_platyrhynchos_platyrhynchos_13_21327675_21334533_F

Intron Information:

Intron Rank:

131288

Intron Class:

major

Intron Phase:

Intron Coordinates:

21327675 - 21334533

Intron Length:

6859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAG

U12 Branch Point Sequence:

TGTTCAGCAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.6

37.3

Major BPS

59.4

0.23

1.5

69.4

37.7

Major PPT

89.2

0.88

0.6

Minor 5ss

31.2

-2.1

3.5

46.7

48.6

Minor BPS

-0.4

2.4

63.4

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031760

21326712 - 21334600

7889