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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2137466_2158107_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2137466 - 2158107

Intron Length:

20642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCAAAT

U12 Branch Point Sequence:

TTGCCCTCACTT

Flanking Amino Acid:

LNSVAQELKEVNQNVEIQRA

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

55.9

0.15

61.2

32.6

Major PPT

82.5

0.73

0.8

77.1

37.1

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

53.4

0.18

1.9

73.61

43.5

Associated Gene:

Gene:

BICD2

Ensembl Gene ID:

ENSAPLG00000015296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038274

2091527 - 2173803

82277

ENSAPLT00000032594

2091527 - 2175391

83865

ENSAPLT00000022962

2091527 - 2176919

85393

ENSAPLT00000015949

2091527 - 2173803

82277

ENSAPLT00000041121

2091527 - 2173803

82277