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Intron Name: Anas_platyrhynchos_platyrhynchos_13_21404127_21408538_R

Intron Information:

Intron Rank:

131557

Intron Class:

major

Intron Phase:

Intron Coordinates:

21404127 - 21408538

Intron Length:

4412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTCATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TGTTAAATAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

73.7

33.1

Major BPS

84.8

0.86

85.7

34.9

Major PPT

82.6

0.73

0.9

35.5

Minor 5ss

33.6

-1.9

41.1

45.4

Minor BPS

46.5

-0.2

2.1

64.52

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021401

21403421 - 21410028

6608

ENSAPLT00000035494

21404016 - 21410028

6013