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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2158261_2160339_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2158261 - 2160339

Intron Length:

2079

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTAGTA

Flanking Amino Acid:

KQVSVLKQNQVEFEGLKHEI

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.7

1.17

0.7

98.4

4.81

Major BPS

100

1.24

0.5

100

Major PPT

81.2

0.7

0.9

77.7

40.6

Minor 5ss

28.3

-2.5

4.2

48.7

47.5

Minor BPS

66.1

0.5

1.8

80.77

34.9

Associated Gene:

Gene:

BICD2

Ensembl Gene ID:

ENSAPLG00000015296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032594

2091527 - 2175391

83865

ENSAPLT00000022962

2091527 - 2176919

85393

ENSAPLT00000015949

2091527 - 2173803

82277

ENSAPLT00000041121

2091527 - 2173803

82277

ENSAPLT00000038274

2091527 - 2173803

82277