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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2162849_2163887_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2162849 - 2163887

Intron Length:

1039

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

TGGTAAACAATAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TCTTGGTAAACA

Flanking Amino Acid:

LRTVLKANKQTAEVALANLK

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.8

43.8

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

52.5

0.06

45.9

40.3

Minor 5ss

33.3

-1.9

2.8

39.7

45.9

Minor BPS

46.2

-0.2

2.6

66.36

46.4

Associated Gene:

Gene:

BICD2

Ensembl Gene ID:

ENSAPLG00000015296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015949

2091527 - 2173803

82277

ENSAPLT00000041121

2091527 - 2173803

82277

ENSAPLT00000038274

2091527 - 2173803

82277

ENSAPLT00000032594

2091527 - 2175391

83865

ENSAPLT00000022962

2091527 - 2176919

85393