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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2271836_2275837_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2271836 - 2275837

Intron Length:

4002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTCTAT

U12 Branch Point Sequence:

CTCTCTGTTACA

Flanking Amino Acid:

PFKDVVQNIQKQEVCGNLTL

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

80.5

Major BPS

61.5

0.29

1.3

62.1

44.1

Major PPT

0.7

0.8

33.4

Minor 5ss

-0.2

2.5

67.3

43.8

Minor BPS

47.4

-0.2

2.3

62.32

44.3

Associated Gene:

Gene:

FGD3

Ensembl Gene ID:

ENSAPLG00000015568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016274

2254478 - 2308011

53534