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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2297179_2299071_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2297179 - 2299071

Intron Length:

1893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATGTTTTAATA

Flanking Amino Acid:

RRHHCKQCGAVICAKCSEFK

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

82.6

31.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.1

0.63

0.9

73.2

36.2

Minor 5ss

45.2

-0.5

2.8

62.5

42.2

Minor BPS

66.6

0.52

1.3

71.36

35.3

Associated Gene:

Gene:

FGD3

Ensembl Gene ID:

ENSAPLG00000015568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016274

2254478 - 2308011

53534