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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2342347_2366625_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2342347 - 2366625

Intron Length:

24279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCGTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTGCAT

U12 Branch Point Sequence:

TTGTGTTGCATT

Flanking Amino Acid:

VKNTTQVKNKGQCSRIFPPQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

57.3

0.18

1.6

71.4

45.1

Major PPT

86.1

0.81

0.8

80.9

31.1

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

-0.3

2.2

67.85

43.9

Associated Gene:

Gene:

SUSD3

Ensembl Gene ID:

ENSAPLG00000015452

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020740

2319501 - 2382598

63098

ENSAPLT00000016099

2314399 - 2382598

68200