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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2388480_2401096_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2388480 - 2401096

Intron Length:

12617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTAAGTGAG

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTCTCTTACA

Flanking Amino Acid:

PPPGPCSTERFRNPKASLHT

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

65.3

40.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

0.97

0.6

88.1

21.9

Minor 5ss

-1.8

3.2

40.9

45.3

Minor BPS

61.9

0.37

1.9

80.2

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021793

2387565 - 2411365

23801

ENSAPLT00000020664

2387565 - 2411365

23801