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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2397664_2397827_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2397664 - 2397827

Intron Length:

164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTTAGTATT

5'SS Class:

major

3'SS Sequence:

CTCTAAATCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

TTCTCCTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.3

76.3

38.8

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

69.1

0.43

0.9

61.7

37.5

Minor 5ss

40.9

-1

2.9

63.4

40.5

Minor BPS

1.3

0.9

95.75

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045875

2397583 - 2411365

13783