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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2399357_2401096_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2399357 - 2401096

Intron Length:

1740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTCTCTTACA

Flanking Amino Acid:

QILTDTEAEKFRNPKASLHT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

80.2

30.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

0.97

0.6

88.1

21.9

Minor 5ss

45.1

-0.5

2.6

58.1

46.5

Minor BPS

61.9

0.37

1.9

80.2

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035727

2388464 - 2411365

22902

ENSAPLT00000025820

2393176 - 2411365

18190

ENSAPLT00000047661

2388032 - 2411365

23334

ENSAPLT00000021919

2396813 - 2411365

14553

ENSAPLT00000045875

2397583 - 2411365

13783

ENSAPLT00000042856

2393176 - 2411365

18190