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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2401251_2405729_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2401251 - 2405729

Intron Length:

4479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

CTTTTATTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTGCTTTTATTT

Flanking Amino Acid:

YNDLPSRKILKTTDSTEIDT

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

68.7

39.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

84.7

0.78

0.7

77.8

35.6

Minor 5ss

40.8

-1

2.8

45.7

43.5

Minor BPS

56.1

0.27

1.5

72.24

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021919

2396813 - 2411365

14553

ENSAPLT00000045875

2397583 - 2411365

13783

ENSAPLT00000021793

2387565 - 2411365

23801

ENSAPLT00000042856

2393176 - 2411365

18190

ENSAPLT00000035727

2388464 - 2411365

22902

ENSAPLT00000025820

2393176 - 2411365

18190