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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2401251_2407966_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2401251 - 2407966

Intron Length:

6716

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

TCGTTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAT

U12 Branch Point Sequence:

TCTGCCCTAATG

Flanking Amino Acid:

YNDLPSRKILSPVFFLTCFS

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

68.7

39.1

Major BPS

69.6

0.49

1.1

69.5

Major PPT

80.2

0.68

0.8

73.6

Minor 5ss

40.8

-1

2.8

45.7

43.5

Minor BPS

56.5

0.07

1.9

63.6

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047661

2388032 - 2411365

23334

ENSAPLT00000020664

2387565 - 2411365

23801