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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2567844_2569010_F


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2567844 - 2569010

Intron Length:
1167

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATTAAAA

5'SS Class:
major

3'SS Sequence:
GTATTCTTTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AACTGAT

U12 Branch Point Sequence:
AGAAGTTGAACT

Flanking Amino Acid:
PQSTQQSEGPDLEQSDDQQV

Intron Amino Acid Position:
1276

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.5
0.58
1
71.5
33.3

Major BPS
74.7
0.61
0.9
63.4
35.6

Major PPT
77.9
0.63
0.9
70.2
41.1

Minor 5ss
38.9
-1.2
2.8
48.9
46.9

Minor BPS
46.7
-0.1
1.9
61.96
41.4

Associated Gene:

Gene:
WNK2

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2486692 - 2602621
115930

2485545 - 2602621
117077

2486692 - 2597153
110462

2485545 - 2594944
109400

2486779 - 2594944
108166

2486692 - 2602542
115851

2486779 - 2602621
115843

2486779 - 2602621
115843