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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2594706_2596078_F


Intron Information:

Intron Rank:
28

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2594706 - 2596078

Intron Length:
1373

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTACCC

5'SS Class:
major

3'SS Sequence:
AATTTTAATTAAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTTTTTAATT

Flanking Amino Acid:
VSPSLPVPMPVCTVGGMDTS

Intron Amino Acid Position:
2223

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.9
0.45
1.1
56.5
41.1

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
63.1
0.3
1.2
66.6
42.6

Minor 5ss
32.2
-2
3.2
44
43.2

Minor BPS
84.9
1.17
0.8
94.97
24.6

Associated Gene:

Gene:
WNK2

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2486692 - 2597153
110462