Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_2594706_2602513_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2594706 - 2602513

Intron Length:

7808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTACCC

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

CGGTCTGTGATC

Flanking Amino Acid:

VSPSLPVPMPDSENATASD*

Intron Amino Acid Position:

2223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.1

56.5

41.1

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

89.5

0.89

0.7

88.9

28.2

Minor 5ss

32.2

-2

3.2

43.2

Minor BPS

46.2

-0.3

53.05

39.8

Associated Gene:

Gene:

WNK2

Ensembl Gene ID:

ENSAPLG00000012731

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030548

2486692 - 2602542

115851