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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2652642_2661595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2652642 - 2661595

Intron Length:

8954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGAGT

5'SS Class:

major

3'SS Sequence:

CATGTTTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

CATGTTTTCACA

Flanking Amino Acid:

GPEHPLASLKVRAHQLVLPP

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.52

1.1

66.9

44.1

Major BPS

0.47

1.2

61.1

45.5

Major PPT

77.8

0.62

0.9

71.8

37.8

Minor 5ss

32.3

-2

3.5

48.9

46.9

Minor BPS

48.5

-0.1

1.8

58.95

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013514

2625543 - 2693380

67838