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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2662296_2663372_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2662296 - 2663372

Intron Length:

1077

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

ACTTGCAATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TCCTCCCCACTT

Flanking Amino Acid:

PMPFHPPHYLAARPNQFGMP

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

67.1

0.39

59.8

40.1

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

45.4

-0.2

2.1

64.35

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013514

2625543 - 2693380

67838