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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2677221_2678588_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2677221 - 2678588

Intron Length:

1368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCCTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

TATTGGCTAATG

Flanking Amino Acid:

THLMVLCCVLRYMVQWPGVR

Intron Amino Acid Position:

627

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.2

85.2

32.2

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

75.6

0.58

0.8

69.9

30.9

Minor 5ss

-1.8

3.3

49.7

46.6

Minor BPS

43.1

-0.6

2.6

56.96

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013514

2625543 - 2693380

67838