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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2686541_2690224_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2686541 - 2690224

Intron Length:

3684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCAAAACTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

TTTTCCTCAAAA

Flanking Amino Acid:

QVVSVGGPARGRPRGVISTP

Intron Amino Acid Position:

890

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

35.3

Major BPS

73.1

0.58

73.8

32.3

Major PPT

67.3

0.39

58.2

41.7

Minor 5ss

32.5

-2

3.1

33.3

41.7

Minor BPS

74.5

0.77

1.6

85.51

33.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013514

2625543 - 2693380

67838