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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2705407_2705769_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2705407 - 2705769

Intron Length:

363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGGACA

5'SS Class:

major

3'SS Sequence:

GGCATTTTGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCAAAT

U12 Branch Point Sequence:

CGTCTCTCGACA

Flanking Amino Acid:

RGNIAMLQADEKQQKLPSGR

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.3

72.3

Major BPS

62.1

0.3

1.2

67.3

37.8

Major PPT

54.1

0.09

1.2

55.6

43.7

Minor 5ss

33.9

-1.8

3.1

40.3

38.8

Minor BPS

50.6

0.01

1.6

60.57

39.2

Associated Gene:

Gene:

PHF2

Ensembl Gene ID:

ENSAPLG00000013367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026981

2705035 - 2800486

95452