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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2705958_2756637_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2705958 - 2756637

Intron Length:

50680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACACAA

5'SS Class:

major

3'SS Sequence:

TTAAATATTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTGCTTTTAAAT

Flanking Amino Acid:

CDACKDWFHGSCVGVEEEEA

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.2

67.8

39.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.52

63.2

46.5

Minor 5ss

36.8

-1.5

3.1

47.7

Minor BPS

58.2

0.34

1.4

69.73

41.5

Associated Gene:

Gene:

PHF2

Ensembl Gene ID:

ENSAPLG00000013367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026981

2705035 - 2800486

95452

ENSAPLT00000036744

2705189 - 2801486

96298