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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2760556_2761586_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2760556 - 2761586

Intron Length:

1031

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGTGGA

5'SS Class:

major

3'SS Sequence:

CATTCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAGCAT

U12 Branch Point Sequence:

TACTGTCCAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

67.8

37.5

Major BPS

63.3

0.33

1.5

41.2

Major PPT

86.7

0.83

0.7

84.4

Minor 5ss

39.9

-1.1

3.1

48.4

45.8

Minor BPS

43.9

-0.4

2.1

57.23

42.2

Associated Gene:

Gene:

PHF2

Ensembl Gene ID:

ENSAPLG00000013367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034920

2760555 - 2800486

39932