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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2774960_2775575_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2774960 - 2775575

Intron Length:

616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATCTGT

5'SS Class:

major

3'SS Sequence:

CTTTGTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

ATGCTTTTAAGT

Flanking Amino Acid:

LHSLSVEMQMRAYEVERRLK

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

71.6

40.9

Major BPS

75.6

0.64

1.5

34.5

Major PPT

83.3

0.75

0.9

77.5

35.5

Minor 5ss

45.6

-0.5

2.9

65.6

45.5

Minor BPS

56.8

0.29

1.6

70.84

40.6

Associated Gene:

Gene:

PHF2

Ensembl Gene ID:

ENSAPLG00000013367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030792

2745357 - 2800486

55130

ENSAPLT00000026981

2705035 - 2800486

95452

ENSAPLT00000013981

2744173 - 2800486

56314

ENSAPLT00000036744

2705189 - 2801486

96298

ENSAPLT00000034920

2760555 - 2800486

39932