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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2775683_2776865_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2775683 - 2776865

Intron Length:

1183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

AGCATTTGAATG

Flanking Amino Acid:

MGKHLLETFKGLHKAGQQPP

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.8

42.1

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

76.9

0.6

0.8

77.2

31.5

Minor 5ss

34.9

-1.7

3.3

47.4

Minor BPS

45.9

-0.4

1.4

43.35

36.3

Associated Gene:

Gene:

PHF2

Ensembl Gene ID:

ENSAPLG00000013367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013981

2744173 - 2800486

56314

ENSAPLT00000036744

2705189 - 2801486

96298

ENSAPLT00000034920

2760555 - 2800486

39932

ENSAPLT00000030792

2745357 - 2800486

55130

ENSAPLT00000026981

2705035 - 2800486

95452