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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2776958_2778245_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2776958 - 2778245

Intron Length:

1288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTGGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAGAA

U12 Branch Point Sequence:

TGTACAGAAACA

Flanking Amino Acid:

GAFRSWTKKQALAEHEDELP

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.3

34.5

Major BPS

57.1

0.18

52.9

34.1

Major PPT

71.1

0.47

69.7

41.5

Minor 5ss

28.3

-2.5

3.5

37.3

47.4

Minor BPS

43.5

-0.4

2.4

62.15

43.5

Associated Gene:

Gene:

PHF2

Ensembl Gene ID:

ENSAPLG00000013367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026981

2705035 - 2800486

95452

ENSAPLT00000036744

2705189 - 2801486

96298

ENSAPLT00000013981

2744173 - 2800486

56314

ENSAPLT00000034920

2760555 - 2800486

39932

ENSAPLT00000030792

2745357 - 2800486

55130