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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2780029_2780901_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2780029 - 2780901

Intron Length:

873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TCCTCATTAAGA

Flanking Amino Acid:

TKIETPKKGKAAKNVLSVPN

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

38.4

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

87.5

0.84

0.7

81.1

30.9

Minor 5ss

-2.4

3.2

46.1

Minor BPS

57.6

0.24

68.02

44.4

Associated Gene:

Gene:

PHF2

Ensembl Gene ID:

ENSAPLG00000013367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034920

2760555 - 2800486

39932

ENSAPLT00000030792

2745357 - 2800486

55130

ENSAPLT00000026981

2705035 - 2800486

95452

ENSAPLT00000013981

2744173 - 2800486

56314

ENSAPLT00000036744

2705189 - 2801486

96298