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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2783511_2785342_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2783511 - 2785342

Intron Length:

1832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGTAA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTTGTTTTCACA

Flanking Amino Acid:

KPKVESVSYKSDDSSDEDLL

Intron Amino Acid Position:

716

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

73.6

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

84.1

0.77

0.8

79.2

32.9

Minor 5ss

42.1

-0.9

3.1

54.8

49.4

Minor BPS

51.7

0.05

1.9

65.59

41.9

Associated Gene:

Gene:

PHF2

Ensembl Gene ID:

ENSAPLG00000013367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030792

2745357 - 2800486

55130

ENSAPLT00000026981

2705035 - 2800486

95452

ENSAPLT00000013981

2744173 - 2800486

56314

ENSAPLT00000036744

2705189 - 2801486

96298

ENSAPLT00000034920

2760555 - 2800486

39932