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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2796725_2797912_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2796725 - 2797912

Intron Length:

1188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTTG

5'SS Class:

strong_major

3'SS Sequence:

TGTCATTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

GTCATTTTAAAG

Flanking Amino Acid:

AAAAAKLSQQEEQKGKKKKN

Intron Amino Acid Position:

930

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

75.6

36.7

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

0.47

1.1

70.7

38.8

Minor 5ss

34.9

-1.7

3.4

45.9

49.3

Minor BPS

51.2

-0.1

1.5

53.42

41.5

Associated Gene:

Gene:

PHF2

Ensembl Gene ID:

ENSAPLG00000013367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030792

2745357 - 2800486

55130

ENSAPLT00000026981

2705035 - 2800486

95452

ENSAPLT00000013981

2744173 - 2800486

56314

ENSAPLT00000036744

2705189 - 2801486

96298

ENSAPLT00000034920

2760555 - 2800486

39932