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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2815399_2817323_F

Intron Information:

Intron Rank:

132207

Intron Class:

major

Intron Phase:

Intron Coordinates:

2815399 - 2817323

Intron Length:

1925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCCCAG

U12 Branch Point Sequence:

TTTCCCCCCAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

1.2

81.4

32.7

Major BPS

39.5

-0.6

1.5

43.7

39.4

Major PPT

100

1.12

0.4

100

Minor 5ss

35.7

-1.6

3.3

48.3

41.3

Minor BPS

43.2

-0.4

2.4

70.61

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032915

2815091 - 2818123

3033